What Is Genomic Imprinting?

As you likely already know, children inherit genes from their parents; this is the fundamental way in which genetic traits are passed on between generations. In the vast majority of cases, children inherit one set of genes from their mother and one from their father. When these genes undergo recombination, the alleles reconstitute and a unique genetic expression is generated. However, in some cases, only one gene is expressed—and an instance of genomic imprinting occurs.

I thought we were going to do everything together memeThe intricacies of this genetic phenomenon are very interesting, as are the potential repercussions when genomic imprinting does not occur in an accurate fashion.

What is Genomic Imprinting?

Basically speaking, genomic imprinting is an event in which only one gene is expressed, either from your mother or from your father, while the other is suppressed. While in most instances, if a gene is activated, both genes will be expressed, genomic imprinting occurs in a small number of key genes that are linked to the sex of each parent.

Suppressing gene expression is done in a number of ways, one of which is DNA methylation, wherein methyl groups attach to certain nucleotides on a DNA strands, acting as a label for that gene to not be expressed. When a gene is imprinted, it means that it will not be transcribed, and will therefore not be expressed. More importantly, that “label” of methyl groups on the specific gene will be passed on to the subsequent chromosomes following gametogenesis, ensuring that the gene remains imprinted.

Simple diagram of double-stranded DNA

(Photo Credit : Forluvoft / Wikimedia Commons)

Genomic imprinting is our DNA’s method of regulating transcription, and essentially keeping genes turned on or off across multiple generations. Any alteration in the transcription of DNA or chromatin that is inherited is called epigenetics, which can happen naturally or artificially.

The reason that epigenetics exist, particularly in higher eukaryotes, remains hotly debated, but it makes sense from a reproductive perspective. If some genes were turned on or off, it may result in more or less desirable sexual characteristics, which could improve one’s chance of reproduction and the transmission of genes. As natural selection ran its course, those groups with specific imprinted genes that improved their sexual characteristics would have increased fitness. So, while it doesn’t necessarily make sense for the body to carry around a set of genes that is permanently turned off, in the course of evolution, it is easier to flip a switch than make the switch disappear.

The Danger of Genomic Imprinting

While genomic imprinting happens in less than 100 genes in a human, that doesn’t mean it has no real effect, nor does it guarantee that the imprinting always happens in the correct way. In fact, there are a number of instances in which disease has been directly linked to genomic imprinting errors.

For example, an error in genomic imprinting may mean that a gene that should have been turned on, is instead turned off, or perhaps one that should have remained off has been turned on. This can result in the activation of both genes, or neither of the genes (as oppose to only 1 being imprinted, and 1 being expressed).

Actual footage of incorrect genomic imprinting memeTwo of the main examples of diseases linked to genomic imprinting errors are Prader-Willi Syndrome and Angelman Syndrome. Both of these conditions are linked to defects on the same imprinted region of chromosome 15. Multiple genes on the egg are imprinted, while at least one gene is imprinted on the sperm. Imprinting errors—or deletions—resulting in two active or two inactive genes can lead to significant developmental disabilities, cognitive issues, obesity, cancer and other dangerous side effects. Prader-Willi occurs when the copy of the gene from the father is missing, or when there are two maternal copies of the gene. Angelman Syndrome is the opposite, in which the copy of the maternal gene is missing, or when there are two paternal genes. Lacking the correct amount of active genes in these cases can lead to depression, uncontrollable laughter, learning disabilities, compulsive eating and jerky movements.

A Final Word

The trouble with genomic imprinting, of course, is that it remains strictly outside of our control. In other words, there is no way to improve the process of DNA transcription to ensure that errors in genomic imprinting don’t occur. That being said, there are ways to protect ourselves against dangerous epigenetic mutations. Essentially, since there is only one copy of these genes present/active in our body, they are particularly susceptible to mutations. Environmental signals like diet, hormones, activity and toxin levels can all affect the imprinting of these genes, so taking care of your body and being aware of environmental factors can help you lower the risk of these dangerous epimutations.


  1. National Institutes Of Health (NIH)
  2. Wikipedia
  3. The University Of Utah
  4. Mayo Clinic
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John Staughton is a traveling writer, editor, publisher and photographer who earned his English and Integrative Biology degrees from the University of Illinois. He is the co-founder of a literary journal, Sheriff Nottingham, and the Content Director for Stain’d Arts, an arts nonprofit based in Denver. On a perpetual journey towards the idea of home, he uses words to educate, inspire, uplift and evolve.

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